BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H10LP1|AL428985
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1687 1494 0.0
>3x_Contig1687
Length = 12800
Score = 1494 bits (739), Expect = 0.0
Identities = 803/837 (95%), Gaps = 2/837 (0%)
Strand = Plus / Minus
Query: 1 ggatcctgatactgcatttaca-tttaacwgagttccggacggttcttcagcgcaggtgc 59
||||||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 7893 ggatcctgagactgcatttacagttttacagagttccggacggttcttcagcgcaggtgc 7834
Query: 60 tgatttctcttccataakahaagakaatacacacaattctgatggtactctacctaagtg 119
||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||
Sbjct: 7833 tgatttctcttccataagaaaagagaatacacacaattctgatggtactctacctaagtg 7774
Query: 120 ggcttctgctttcytaagtagaaatwcttatgtcacaaatkctttcattgtgcattccaa 179
||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 7773 ggcttctgctttcctaagtagaaatacttatgtcacaaatgctttcattgtgcattccaa 7714
Query: 180 acctatcatctgttgtctaaatggacctgcagtagggctaagtgccgcaatcgtgatgat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7713 acctatcatctgttgtctaaatggacctgcagtagggctaagtgccgcaatcgtgatgat 7654
Query: 240 atgtgacattgtatactgtatgawcgataaaktttatttacaattcccatttkctaagat 299
||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||
Sbjct: 7653 atgtgacattgtatactgtatgaacgataaagtttatttacaattcccatttgctaagat 7594
Query: 300 tggacttgtcactgagggttcaacctctatwactttacccttaahaattgggtacgcaag 359
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 7593 tggacttgtcactgagggttcaacctctataactttacccttaaaaattgggtacgcaag 7534
Query: 360 agctcaaaacacgctattcttcaataagcctttgacgtacgatattttggaggattcggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7533 agctcaaaacacgctattcttcaataagcctttgacgtacgatattttggaggattcggt 7474
Query: 420 ttcactgagaaattatcaactagatgattggwaacagtttaatgaacaggcgctatcaga 479
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7473 ttcactgagaaattatcaactagatgattggaaacagtttaatgaacaggcgctatcaga 7414
Query: 480 tttgaagaaagatgtgawaggcttaawtctgacaagcataattgttatgatgatattgat 539
||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 7413 tttgaagaaagatgtgaaaggcttaaatctgacaagcataattgttatgaagaaattgat 7354
Query: 540 twakgtaacttggatgchgcatttgctccgggcaaatgcctctgawgtwactgatgctat 599
| | | ||||||||||| ||||||||||||||||||||||||||| || |||||||||||
Sbjct: 7353 taaggaaacttggatgcagcatttgctccgggcaaatgcctctgaagtaactgatgctat 7294
Query: 600 gcctttctggtttgatggtatccctcaycgtyactttctgaagatgttgaaaagggcaga 659
|||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 7293 gcctttctggattgatggtatccctcaaagtaactttctgaagatgttgaaaagggcaga 7234
Query: 660 agctaatagatccaaatcaagattatgactttcctccacttgctcgtaagcgctatttcg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7233 agctaatagatccaaatcaagattatgactttcctccacttgctcgtaagcgctatttcg 7174
Query: 720 ttttgtcagttttcggaagtgttttthaatatgtwagtttaaagtaactccgaatcagaa 779
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 7173 ttttgtcagttttcggaagtgtttttaaatatgtaagtttaaagtaactccgaatcagaa 7114
Query: 780 actgttcatatgtatgacacctctatgctacttttcaatgcaat-cattatkactat 835
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 7113 actgttcatatgtatgacacctctatgctacttttcaatgcaatacattatgactat 7057
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4723
Number of Sequences: 1807
Number of extensions: 4723
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.6 bits)